Slide scan
Slide scan creates a digital copy of the slide and provides it on the Celly website.
The test works just in configuration with motorized stage connected.
Initial settings
Open the Celly App -> settings (gear icon):
Crop: 0.10-0.15 (green rectangle shouldn't fall on the black borders)
Mini-map: Off
Motorized Stage: On (can require app restart)
Motorized Slide Scan: On
Skip prescan step: On
Virtual pad: On
Adapter: Other
Recording: Off
Open the Celly App -> configure analysis -> Type = Slide Scan.
Now we should make important calibrations.
Set scan area
Settings -> Set scan area -> Move with virtual pad, to take the scan area.
Color calibration
Move with Virtual Pad to the empty area.
Settings -> Choose Objective magnification x4 (+ set physically x4 objective) -> calibrate color.
Repeat the procedure for all magnifications. After the calibrations restart the app.
Height calibration
Move with Virtual Pad to area with tissue. Set x10 objective.
Settings -> Calibrate height -> wait for the device automatically find the best focus.
Now you can make slide scans.
Scanning
Open the Celly App -> configure analysis -> Type = Slide Scan.
Push "Start" button and follow instructions.
After the step go to the website. Open the Tests page. Push the View button to open your scan.
Hold <SHIFT> to add annotation on the scan
What's next?
The best way to explore the Celly interface is to check the Education module, which includes:
Last updated